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🦈 NucleiSegmentationBoundaryModel

Nucleus segmentation for fluorescence microscopy

fluorescence-light-microscopy nuclei instance-segmentation unet ...

🐸 StarDist H&E Nuclei Segmentation

StarDist - Object Detection with Star-convex Shapes

whole-slide-imaging 2d nuclei tensorflow ...

🐅 LiveCellSegmentationBoundaryModel

Cell segmentation for phase-contrast microscopy.

2d transmission-light-microscopy label-free cells ...

🦐 Neuron Segmentation in EM (Membrane Prediction)

Neuron segmentation in EM, trained on the CREMI challenge data.

unet neurons instance-segmentation electron-microscopy ...

🐓 Pancreatic Phase Contrast Cell Segmentation (U-Net)

DeepImageJ compatible U-Net trained to segment phase contrast mi...

deepimagej pancreatic-stem-cells segmentation phase-contrast ...

🐡 EnhancerMitochondriaEM2D

Prediction enhancer for segmenting mitochondria in EM images.

unet mitochondria electron-microscopy instance-segmentation ...

🐚 MitochondriaEMSegmentationBoundaryModel

Mitochondria segmentation for electron microscopy.

3d electron-microscopy mitochondria instance-segmentation ...

🦉 Cell Segmentation from Membrane Staining for Plant Tissues

A 3D U-net to predict cell membranes in plant tissues, trained o...

zerocostdl4mic deepimagej segmentation 3d ...

🦡 PlatynereisEMnucleiSegmentationBoundaryModel

{organelle} segmentation in EM of platynereis.

unet nuclei instance-segmentation electron-microscopy ...

🦀 StarDist Fluorescence Nuclei Segmentation

StarDist - Object Detection with Star-convex Shapes

fluorescence-light-microscopy whole-slide-imaging other 2d ...

🦙 B. Sutilist bacteria segmentation - Widefield microscopy - 2D UNet

This trained 2D U-Net model segments the contour, foreground and...

zerocostdl4mic deepimagej segmentation unet ...

🦔 PlatynereisEMcellsSegmentationBoundaryModel

Cell segmentation in EM of platynereis.

unet cells instance-segmentation electron-microscopy ...

🦜 HPA Cell Segmentation (DPNUnet)

Cell segmentation model for segmenting images from the Human Pro...

torchscript unet nucleus-segmentation deepimagej ...

🦗 3D UNet Arabidopsis Apical Stem Cells

3D Unet trained on confocal images of Arabidopsis thaliana apica...

3d torchscript ilastik unet ...

🦅 Arabidopsis Leaf Segmentation

Perform leaf segmentation in light microscopy images of Arabidop...

zerocostdl4mic deepimagej segmentation unet

🐼 Neuron Segmentation in 2D EM (Membrane)

2D UNet trained using ZeroCostDL4Mic notebooks on data from ISBI...

zerocostdl4mic deepimagej segmentation electron-microscopy ...